dbCAN-seq: a database of CAZyme sequence and annotation

Gene clsuter ID: MGYG000000053_1|CGC2
Gene ID: MGYG000000053_00220
Location and strand information: 245481 - 246743 (+)
Family: 8.A.1.6.1
Protein type: TC
Protein description: Efflux pump periplasmic linker BepF

Gene clsuter ID: MGYG000000053_1|CGC2
Gene ID: MGYG000000053_00221
Location and strand information: 246748 - 249840 (+)
Family: 2.A.6.2.22
Protein type: TC
Protein description: Efflux pump membrane transporter BepE

Gene clsuter ID: MGYG000000053_1|CGC2
Gene ID: MGYG000000053_00222
Location and strand information: 249837 - 251222 (+)
Family: 2.A.6.2.18
Protein type: TC
Protein description: Outer membrane protein OprM

Gene clsuter ID: MGYG000000053_1|CGC2
Gene ID: MGYG000000053_00223
Location and strand information: 251302 - 253920 (-)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000000053_1|CGC2
Gene ID: MGYG000000053_00224
Location and strand information: 254174 - 255520 (+)
Family: GH29
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 4.6857
Protein molecular weight: 51137.5
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000000053_1|CGC2
Gene ID: MGYG000000053_00225
Location and strand information: 255530 - 257575 (+)
Family: CBM9|CBM0
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 5.0057
Protein molecular weight: 78619.96
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000000053_1|CGC2
Gene ID: MGYG000000053_00226
Location and strand information: 257918 - 258565 (+)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000000053_1|CGC2
Gene ID: MGYG000000053_00227
Location and strand information: 258637 - 260346 (+)
Family: GH33|GH0
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 6.8707
Protein molecular weight: 63422.69
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000000053_1|CGC2
Gene ID: MGYG000000053_00228
Location and strand information: 260726 - 261883 (+)
Family: null
Protein type: null
Protein description: Diaminopimelate decarboxylase

Gene clsuter ID: MGYG000000053_1|CGC2
Gene ID: MGYG000000053_00229
Location and strand information: 261896 - 262795 (+)
Family: 2.A.7.3.57
Protein type: TC
Protein description: hypothetical protein

Gene clsuter ID: MGYG000000053_1|CGC2
Gene ID: MGYG000000053_00230
Location and strand information: 262790 - 264151 (-)
Family: PALP
Protein type: STP
Protein description: Tryptophan synthase beta chain

Gene clsuter ID: MGYG000000053_1|CGC2
Gene ID: MGYG000000053_00231
Location and strand information: 264474 - 266939 (+)
Family: null
Protein type: null
Protein description: Phenylalanine--tRNA ligase beta subunit

Gene clsuter ID: MGYG000000053_1|CGC2
Gene ID: MGYG000000053_00232
Location and strand information: 267005 - 269158 (-)
Family: GH20
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 7.2654
Protein molecular weight: 80402.42
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000000053_1|CGC2
Gene ID: MGYG000000053_00233
Location and strand information: 269271 - 271853 (+)
Family: GH77|CBM20
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 5.4976
Protein molecular weight: 97999.34
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000000053_1|CGC2
Gene ID: MGYG000000053_00234
Location and strand information: 271923 - 272678 (-)
Family: LytTR
Protein type: TF
Protein description: Transcriptional regulatory protein YpdB

Gene clsuter ID: MGYG000000053_1|CGC2
Gene ID: MGYG000000053_00235
Location and strand information: 272680 - 274053 (-)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000000053_1|CGC2
Gene ID: MGYG000000053_00236
Location and strand information: 274263 - 275570 (+)
Family: 2.A.2.6.3
Protein type: TC
Protein description: hypothetical protein

Gene clsuter ID: MGYG000000053_1|CGC2
Gene ID: MGYG000000053_00237
Location and strand information: 275765 - 278653 (+)
Family: 1.B.14.6.1
Protein type: TC
Protein description: TonB-dependent receptor SusC

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CGC gene composition diagram

Gene composition table

Substrate predicted by dbCAN-PUL is chitin download this fig

Genomic location

Protein ID	Protein Name	Type	Start	End	Strand	Signature
MGYG000000053_00220	Efflux pump periplasmic linker BepF	TC	245481	246743	+	8.A.1.6.1
MGYG000000053_00221	Efflux pump membrane transporter BepE	TC	246748	249840	+	2.A.6.2.22
MGYG000000053_00222	Outer membrane protein OprM	TC	249837	251222	+	2.A.6.2.18
MGYG000000053_00223	hypothetical protein	null	251302	253920	-	Transglut_core
MGYG000000053_00224	hypothetical protein	CAZyme	254174	255520	+	GH29
MGYG000000053_00225	hypothetical protein	CAZyme	255530	257575	+	CBM9\| CBM0
MGYG000000053_00226	hypothetical protein	null	257918	258565	+	FMN_red
MGYG000000053_00227	hypothetical protein	CAZyme	258637	260346	+	GH33\| GH0
MGYG000000053_00228	Diaminopimelate decarboxylase	null	260726	261883	+	Orn_DAP_Arg_deC\| Orn_Arg_deC_N
MGYG000000053_00229	hypothetical protein	TC	261896	262795	+	2.A.7.3.57
MGYG000000053_00230	Tryptophan synthase beta chain	STP	262790	264151	-	PALP
MGYG000000053_00231	Phenylalanine--tRNA ligase beta subunit	null	264474	266939	+	tRNA_bind\| B3_4\| B5\| tRNA_synthFbeta\| FDX-ACB
MGYG000000053_00232	hypothetical protein	CAZyme	267005	269158	-	GH20
MGYG000000053_00233	hypothetical protein	CAZyme	269271	271853	+	GH77\| CBM20
MGYG000000053_00234	Transcriptional regulatory protein YpdB	TF	271923	272678	-	LytTR
MGYG000000053_00235	hypothetical protein	null	272680	274053	-	His_kinase
MGYG000000053_00236	hypothetical protein	TC	274263	275570	+	2.A.2.6.3
MGYG000000053_00237	TonB-dependent receptor SusC	TC	275765	278653	+	1.B.14.6.1
Protein ID	Protein Name	Type	Start	End	Strand	Signature